MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
4_5BalbC4O2_S4
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 228
bases: 2,789,951 bps
CDS: 2,555
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,625
Total number of protein coding genes annotated/found:
2,555
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5052|JADGLS010000056.1
SEQF5052_00922
Genome Viewer
NA
AA
390/130
871659-871270
hypothetical protein
SEQF5052|JADGLS010000056.1
SEQF5052_00921
Genome Viewer
NA
AA
1317/439
869783-871099
Coenzyme A disulfide reductase
SEQF5052|JADGLS010000056.1
SEQF5052_00920
Genome Viewer
NA
AA
825/275
868907-869731
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU
SEQF5052|JADGLS010000056.1
SEQF5052_00919
Genome Viewer
NA
AA
309/103
868793-868485
Fe-S protein maturation auxiliary factor SufT
SEQF5052|JADGLS010000056.1
SEQF5052_00918
Genome Viewer
NA
AA
1815/605
867937-866123
O-acetyltransferase OatA
SEQF5052|JADGLS010000056.1
SEQF5052_00917
Genome Viewer
NA
AA
2610/870
865920-863311
Chaperone protein ClpB
SEQF5052|JADGLS010000056.1
SEQF5052_00916
Genome Viewer
NA
AA
870/290
862383-863252
HTH-type transcriptional activator AmpR
SEQF5052|JADGLS010000056.1
SEQF5052_00915
Genome Viewer
NA
AA
516/172
862252-861737
hypothetical protein
SEQF5052|JADGLS010000056.1
SEQF5052_00914
Genome Viewer
NA
AA
435/145
861426-860992
Protein map
SEQF5052|JADGLS010000056.1
SEQF5052_00913
Genome Viewer
NA
AA
186/62
860550-860735
hypothetical protein
SEQF5052|JADGLS010000056.1
SEQF5052_00912
Genome Viewer
NA
AA
942/314
860255-859314
3-oxoacyl-[acyl-carrier-protein] synthase 3
SEQF5052|JADGLS010000056.1
SEQF5052_00911
Genome Viewer
NA
AA
1245/415
859302-858058
3-oxoacyl-[acyl-carrier-protein] synthase 2
SEQF5052|JADGLS010000056.1
SEQF5052_00910
Genome Viewer
NA
AA
372/124
857632-858003
hypothetical protein
SEQF5052|JADGLS010000056.1
SEQF5052_00909
Genome Viewer
NA
AA
927/309
857389-856463
Oligopeptide transport system permease protein OppB
SEQF5052|JADGLS010000056.1
SEQF5052_00908
Genome Viewer
NA
AA
1071/357
856463-855393
Oligopeptide transport system permease protein OppC
SEQF5052|JADGLS010000056.1
SEQF5052_00907
Genome Viewer
NA
AA
1083/361
855377-854295
Oligopeptide transport ATP-binding protein OppD
SEQF5052|JADGLS010000056.1
SEQF5052_00906
Genome Viewer
NA
AA
942/314
854305-853364
Oligopeptide transport ATP-binding protein OppF
SEQF5052|JADGLS010000056.1
SEQF5052_00905
Genome Viewer
NA
AA
1656/552
853345-851690
Dipeptide-binding protein DppE
SEQF5052|JADGLS010000056.1
SEQF5052_00904
Genome Viewer
NA
AA
1716/572
851478-849763
Oligopeptide-binding protein AppA
SEQF5052|JADGLS010000056.1
SEQF5052_00903
Genome Viewer
NA
AA
987/329
849711-848725
Oligopeptide transport ATP-binding protein OppD
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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